
QIAGEN CLC LightSpeed Module delivers an ultra-fast, end-to-end hereditary NGS FASTQ to VCF pipeline. LightSpeed takes raw FASTQ files generated by paired-end 150 bp sequencing protocols and performs quality trimming, adapter trimming, read mapping, deduplication, local realignment, QC and germline variant calling.
More details: https://qiagen.showpad.com/share/Tue4ZxKsjAFetyoswbTfE
Cloud module: QIAGEN CLC Genomics Cloud computing software allows you to launch analyses from CLC Workbenches or CLC Servers for execution on AWS.
https://qiagen.showpad.com/share/ct2e3M9LfLazzuMMchqhG
• Overview of Genomics workbench and Platform
• Server / Cloud module overview
• Breaking the speed of light
• LightSpeed is arguably the fastest and cheapest-to-run hereditary FASTQ-to-VCF WGS pipeline available
• Benchmarks / comparisons
• Demo of lightspeed and cloud module for Fastq to vcf
• Install plugin
• Download reference(s)
• Execute workflow and review results
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