Cloud Plugin latest improvements
Cloud Plugin 21.0.1
Released on February 22, 2021
Bug fixes
- Fixed an issue that could cause jobs submitted to the CLC Genomics Cloud Engine that involved many input objects or many iterations to fail with an error including the message “Argument List Too Long”.
Cloud Plugin 21.0
Released on January 12, 2021
New features
Improvements
When connecting to S3
- Connections to multiple S3 accounts is supported.
- Configuration of S3 accounts is through a dedicated dialog.
When working with the CLC Genomics Cloud Engine
- The machine size to use when executing a workflow on the CLC Genomics Cloud Engine can now be selected when launching the workflow. This replaces the earlier job priority option.
- When launching a workflow to run on the CLC Genomics Cloud Engine, an S3 location for saving workflow outputs can be specified. Previously, only the location to save exported results could be specified.
- An option to cancel jobs, either individually or all jobs in a batch, has been added to the Cloud Job Search tool.
- Improved stability when uploading large amounts of data to CLC Genomics Cloud Engine through a CLC Workbench.
- History information is available in log elements generated by workflows run on the CLC Genomics Cloud Engine.
- It is no longer necessary to enter a CLC Genomics Cloud Engine URL in the Cloud Configuration dialog to be able to submit jobs to the CLC Genomics Cloud Engine via a cloud-enabled CLC Genomics Server.
- Cloud Job Search can now be used from CLC Workbenches where the cloud connection is not configured through the Workbench and authentication is done via a a cloud-enabled CLC Genomics Server.
- The CLC Genomics Cloud Engine login dialog has been updated.
Configuration
- Cloud preset configurations in the CLC Server web administrative interface now allow configuration of hardware requirements for each cloud preset.
Bug fixes
- Fixed an issue that prevented browsing S3 locations through a proxy server.
- Fixed an issue where an error could arise shortly after a very large number of samples were submitted to the CLC Genomics Cloud Engine in batch mode from a CLC Genomics Workbench.
- Fixed an issue that could cause filtering the table in the Cloud Job Search tool to fail with an error.
- Fixed an issue, where a track list generated by a workflow executed in the CLC Genomics Cloud Engine would refer to “unresolved track” after downloading the track list element to the local CLC Genomics Workbench or CLC Genomics Server.
- Fixed an issue where shutting down the CLC Workbench could cancel jobs submitted in batch mode to the CLC Genomics Cloud Engine.
- Fixed issues relating to the naming and placement of outputs specified using output name placeholders (such as {input:2}) that affected workflows containing Iterate elements.
- Fixed an issue where keeping the Cloud Configuration dialog open while launching workflows to run on the CLC Genomics Cloud Engine could result in not being able to save updates made to the cloud configuration.
- Fixed an issue that could result in missing metadata values in the Workflow Result Metadata table produced by workflows run on the CLC Genomics Cloud Engine. This affected some workflows containing multiple Iterate elements when on-the-fly import was used.
Cloud Plugin 20.0.1
Released on June 15, 2020
Improvements
- Cloud Job Search can now be used from the CLC Workbench in cases where the cloud connection is not configured through the Workbench and authentication is done via a a cloud-enabled CLC Server.
- It is no longer necessary to enter the URL of the CLC Genomics Cloud Engine in the Cloud Configuration dialog in order to submit jobs to the cloud through a cloud-enabled CLC Server.
Bug fixes
- Fixed an issue that could cause filtering to fail in the Cloud Job Search table.
- Fixed an issue where keeping the Cloud Configuration dialog open while running workflows could result in not being able to save the changed configuration.
- Fixed an issue that could result in missing metadata values in the Workflow Result Metadata table produced by workflows run on the CLC Genomics Cloud Engine. This affected some workflows containing multiple Iterate elements when on-the-fly import was used.
- Fixed an issue where an error could arise shortly after a very large number of samples were submitted at once with the “Batch” checkbox checked in the CLC Workbench wizard.
Cloud Plugin 20.0
Released on January 16, 2020
First release of this product