Basics:

Getting Started

Molecular Biology Basics

Gateway Cloning

BLAST Searches

Assemble Sequences to a Reference

Phylogenetic Trees and Metadata

Folding RNA molecules

Introduction to Workflows

Transcriptomics:

Small RNA Analysis

Expression Analysis using RNA-Seq

Microarray-based Expression Analysis

Resequencing and Variants Analysis:

Read Mapping in Detail

Reference Genome and Annotations Tracks

Resequencing Analysis using Tracks

Comparative analysis of three bovine genomes

Visualize variants on protein structure

De Novo Assembly:

De Novo Assembly and BLAST

De Novo Assembly of Paired Data

Epigenomics:

ChIP Sequencing

Bisulfite Sequencing